Mine is

1. Dark Eternal Night
2. Vacant/Stream Of Consciouness
3. Panic Attack

Well, I don't know very many of their songs, but out of the ones I have heard, my favorites have to be:
1: In the Name of God
2: Pull Me Under
3: Glass Prison

Well seeinghow they are my favorite band i don't really have favorites but if i were to choose i would say

1. Stream Of Consiousness
2. Pull Me Under
3. Glass Prison/Under A Glass Moon

1) The Killing Hand

2) Fatal Tragedy

3) Innocence Faded

Not really from a guitar point of view that tho

1) Dark Eternal Night
2) These walls
3) In the presence of enemies part 1

Oh, great topic !!!!

1. Metropolis part 1
2. Dance of Eternity
3. The Ytse Jam (I love the main riff !!!)

but there are a lot of great songs